Current Student Publications
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Name of Trainee
(Years In Program)
*Training Grant eligible
**Training Grant supported


Mentor(s) Publications (Authors, Year, Title, Journal)

Glaser, B.T.*
(9/2002- )

Articles on EPub

Burgess

Glaser BT, Bergendahl V, Thompson NE, and Burgess RR. (2007). LRET-Based High-Throughput Screening of a Small-Compound Library for Inhibitors of Bacterial RNA Polymerase. (Submitted)

Bergendahl V, Glaser BT, and Burgess RR. (2003). A fast Western blot procedure improved for quantitative analysis by direct fluorescence labeling of primary antibodies. J Immunol Methods. 277:117-125.

Humston, J
(2002- )
Ervasti Rybakova IN, Humston JL, Sonnemann KJ and Ervast JM (2006). Dystropin and utrophin bind actin through distinct modes of contact. J Biol Chem. 281:9996-1001. PMID 16478721

Lamberski, J.A.**
(2002- )

Articles on EPub

Burgess

Lamberski JA, Thompson NE and Burgess RR. (2006). Expression and purification of a single-chainvariable fragment antibody derived from a polyol-responsive monoclonal antibody. Protein Expression and Purif. 47:82-92.

Thompson NE, Jensen DB, Lamberski JA, and Burgess RR. (2006). Purification of protein complexes by immunoaffinity chromatography: application to transcription machinery. Genet Eng (NY). 27:81-100. Review.

Ramachandran, S
(2003- )

Articles on EPub

Ruoho

Pal A, Hajipour AR, Fontanilla D, Ramachandran S, Chu UB, Mavlyutov T, and Ruoho AE. (2007). Identification of regions of the sigma-1 receptor ligand binding site using a novel photoprobe. Mol Pharmacol. 72:921-933. PMID 17622576

Ramachandran S, Lu H, Prabhu U, and Ruoho AE. (2006). Purification and characterization of the guinea pig sigma-1 receptor functionally expressed in Escherichia coli. Protein Expr Purif. PMID: 16962337

Branam, A*
(2003- )
Greenspan Jasuja R, Ge G, Voss NG, Lyman-Gingerich J, Branam AM, Pelegri FJ, and Greenspan DS. (2007). Bone morphogenetic protein 1 prodomain specifically binds and regulates signaling by bone morphogenetic proteins 2 and 4. J Biol Chem. 282:9053-9062. PMID 17255107
Chung, KY
(2003- )
Walker

Kang M, Chung KY, and Walker JW. (2007) G-protein coupled receptor signaling in myocardium: not for the faint of heart. Physiology (Bethesda). 22:174-184.

Chung KY and Walker JW. (2007). Interaction and inhibitory cross-talk between endothelin and ErbB receptors in the adult heart. Mol Pharmacol. 71:1494-1502.

Chung KY, Lim KM, Chung SM, Lee MY, Noh JY, Bae ON, and Chung JH. (2006). Shear stress-induced pH increase in plasma is mediated by a decrease in P(CO(2)): the increase in pH enhances shear stress-induced P-selectin expression in platelets. Platelets.17:127-133.

Chung KY, Lee SJ, Chung SM, Lee MY, Bae ON, and Chung JH. (2005). Generation of free radical by interaction of iron with thiols in human plasma and its possible significance. Thromb Res. 116:157-164

Fontanilla, D*
(2003- )

Ruoho

Pal A, Hajipour AR, Fontanilla D, Ramachandran S, Chu UB,  Mavlyotov T, and Ruoho AE. (2007). Identification of Regions of the Sigma-1 Receptor Ligand Binding Site Using a Novel Photoprobe. Mol Pharmacol. 72:921-933 PMID 17622576

Fontanilla D, Hajipour AR, Arbabian M, Paul A, Ramachandran S, Mavlyutov T, Sievert MK, and Ruoho AE. (2006). Synthesis and characterization of fenpropimorph derivatives as probes for sigma receptors. Submitted.

Gavala, M**
(9/2003- )
Bertics

Gavala ML, Pfeiffer ZA and Bertics PJ. (2007). The nucleotide receptor P2RX7 mediates ATP-induced CREB activation in Human and Murine monocytic cells. Submitted to J Leukoc Biol.

Guerra AN, Gavala ML, Chung HS, and Bertics PJ. (2007). Nucleotide receptor signaling and the generation of reactive oxygen species. Purinergic Signaling. 3:39-51. 

Pfeiffer ZA, Guerra A, Hill LM, Gavala ML, Prabhu U, Aga M, Hall DJ, and Bertics PJ.  (2007). Nucleotide receptor signaling in murine macrophages is linked to reactive oxygen species generation.  Free Radical Biology and Medicine. 42:1506-1516. 

Bertics PJ, Gavala ML, and Denlinger LC. (2006). Endotoxins. Encyclopedia of Respiratory Medicine. (Ed. Geoffrey J. Laurent and Steven D. Shapiro) Vol 2. Oxford: Elsevier Ltd. pp 80-85. 

 

Guo LW, Hajipour AR, Gavala ML, Arbabian M, Martemyanov KA, Arshavsky VY, and Ruoho AE. (2005). Sulfhydryl-reactive, cleavable, and radioiodinatable benzophenone photoprobes for study of protein-protein interaction. Bioconjug Chem.16:685-693. PMID 15898738

Hopkins, D.R.**
(9/2003- )

Articles on EPub

Greenspan

Hopkins DR, Keles S, and Greenspan DS.  (2007) The bone morphogenetic protein 1/Tolloid-like metalloproteinases. Matrix Biol. (Epub ahead of print). 

Ge G, Hopkins DR, Ho WB, and Greenspan DS. (2005). GDF11 Forms a bone morphogenetic protein 1-activated latent complex that can modulate nerve growth factor-induced differentiation of PC12 cells. Mol Cell Biol. 25:5846-5858.

Ge G, Seo NS, Liang X, Hopkins DR, Hook M, and Greenspan DS. (2004). Bone morphogenetic protein-1/tolloid-related metalloprotein-ases process osteoglycin and enhance its ability to regulate collagen fibrillogenesis. J Biol Chem. 279:41626-41633.

Koziol, C*
(9/2003-)
Bertics No Publications
Marengo, M**
(9/2003- )
Wassarman

Katzenberger RJ*, Marengo MS*, and Wassarman DA. (2006). ATM and ATR pathways signal alternative splicing of Drosophila TAF1 pre-mRNA in response to DNA damage. Mol Cell Biol. 26:9256-9267. *equal contribution

Wagner ED, Marengo MS, and Plewa MJ. (2003). Modulation of the mutagenicity of heterocyclic amines by organophosphate insecticides and their metabolites. Mutat Res. 536:103-115.

Mellman, D.L.**
(9/2003- )

Articles on EPub

Anderson

Mellman DL, Gonzales ML, Song C, Wang P, Kendziorski C, and AAnderson RA (2007). A novel phosphatidylinositol 4,5 bisphosphate regulated nuclear poly(a) polymerase is required for efficient 3’-end processing of select mRNA. Nature. In revision. 

Gonzales ML, Song C, Mellman DL, and Anderson RA. (2007). Regulation of the Star-PAP-PIP kinase complex by an associated protein kinase that is regulated by PIP2. In preparation

Heck JN, Mellman DL, Ling K, Sun, Y, Wagoner MP, Schill NJ and Anderson RA (2007). A Conspicuous connection: Structure defines function for the phosphatidylinositol prosphate kinases family. Critical Revi Biochem and Mol Biology. 42:15-39. PMID 17364683

Chan, KT*
(9/2004- )
Huttenlocher

Cortesio CL, Chan KT, and Huttenlocher A. Adhesion Dynamics in Motile Cells. Cell Junctions. Adhesion, Development, and Disease. (In press for 2008).

Lokuta MA, Senetar MA, Bennin DA, Nuzzi, PA, Chan KT, Ott VL, and Huttenlocher A. Type Ig PIP kinase is a novel uropod component that regulates rear retraction during neutrophil chemotaxis. Molecular Biology of the Cell. (In press for 2007).

Cortesio CL, Chan KT, Perrin BJ, Burton NO, Zhang S, Zhang ZY, and Huttenlocher A. (2007). Calpain 2 and PTP1B function in a novelPathway with Src to regulate invadopodia dynamics and breast cancer cell invasion. J Cell Biology. (Submitted).

Chan KT, Cortesio CL and Huttenlocher A (2007). Integrins in Cell Migration. Methods in Enzymology. 426:47-67 PMID 17697879 
Pavelec, D*
(9/2004- )
Kennedy No Publications
Torres, B**
(9/2004- )
Ruoho No Publications

Wagoner, M.P.**
(9/2004- )

Articles on EPub

Anderson

Wagoner MP, Ling K, and Anderson RA. (2007). Tracking the transport of E-cadherin to and from the plasma membrane. Methods in Molecular biology. In press. 

Sun Y, Ling K, Wagoner MP, and Anderson RA. (2007). Type Ig PIP kinase is required for EGF-stimulated directional cell migration. J Cell Biology. 178:297-308. PMID 17635937

Heck JN, Mellman DL, Ling K, Sun, Y, Wagoner MP, Schill NJ and Anderson RA (2007). A Conspicuous connection:  Structure defines function for the phosphatidylinositol prosphate kinases family. Critical Rev Biochem and Mol Biology. 42:15-39. PMID 17364683

Ling K, Schill NJ, Wagoner MP, Sun Y, and Anderson RA. (2006). Movin' on up: the role of PtdIns(4,5)P(2) in cell migration. Trends Cell Biol. 16:276-284. Review. PMID 16616849

Wang, J*
(9/2004- )
Rapraeger No Publications
Yeh, F**
(9/2004- )
Chapman Dong M, Yeh F, Tepp WH, Dean C, Johnson EA, Janz R. and Chapman ER. (2006). SV2 is the protein receptor for botulinum neurotoxin A. Science. 312:592-596.
Zhang, Z
(2004- )
Jackson No Publications
Zhu, Y
(2004- )
Bertics No Publications

Christopherson, K.R.**
(9/2005- )

Articles on EPub

Czajowski

Venkatachalan S, Bushman J, Mercado JL, Sancar F, Christopherson KR and Boileau AJ. (2007). Optimized expression vector for ion channel studies in Xenopus oocytes and mammalian cells using alfalfa mosaic virus. Pflugers Arch. 454:1551-63. PMID 17146677

Daily, N*
(9/2005- )
Martin No Publications

Heck, J**
(9/2005- )

 

Anderson Heck JN, Mellman DL, Ling K, Sun, Y, Wagoner MP, Schill NJ, and Anderson RA. (2006). A Conspicuous connection: Structure defines function for the phosphatidylinositol prosphate kinases family. Critical Reviews Biochemistry and Molecular Biology. Submitted.
Hoffman, B*
(9/2005- )
Mosher No Publications

Hill, L**
(9/2005- )

Articles on EPub

Bertics

Pfeiffer, ZA, Guerra AN, Hill LM, Gavala ML, Prabhu, Aga M, Hall DJ, and Bertics PJ. (2007). Nucleotide receptor signaling in murine macrophages is linked to reactive oxygen species generation. Free Radic Biol Med. 42:1506-1516.

Bertics PJ, Koziol CJ, Gavala ML, Zhu Y, Hill LM, and Guerra AN. (2007). Signal Transduction. Middleton’s Allergy, 7th Edition.  (Eds. N.F. Adkinson, Jr., W.W. Busse, B.S. Bochner, S.T. Holgate, F.E Simons, and R.F. Lemanske, Jr. Elsevier) The Netherlands. Invited Review.

Hill LM, Pfeiffer ZA, Gavala ML, Guerra AN, and Bertics, PJ. (2007). Nucleotide receptor regulation of the assembly, phosphorylation, and activation of phagocytic NADPH oxidase in LPS-primed macrophages. (Manuscript in Preparation).

Valley CC, Metivier R, Solodin NM, Fowler AM, Mashek MT, Hill L, and Alarid ET. (2005).
Differential regulation of estrogen-inducible proteolysis and transcription by the estrogen receptor-a N terminus. Mol Cell Biol. 25:5417-5428.

Kinter, J*
(9/2005- )
Dovat No Publications
Maiden, S**
(9/2005- )
Hardin King R, Maiden S, Hawkins N, Hardin J, and Walston T. (2007). DSH-2/Dishevelled mediates directed cell rearrangement in the C. elegans embryo.  IN Preparation.
Perry, M*
(9/2005- )
Kelley No Publications
Qi, C*
(9/2005- )
Kalin No Publications
Townsend, J*
(9/2005- )
Johnson Jakel RJ, Townsend JA, Kraft AD, and Johnson JA. (2007). Nrf2-mediated protection against 6-hydroxydopamine. Brain Res. 1144:192-201. PMID 17336276
Best, J*
(9/2006- )
Kamp No Publications
Hedman, A**
(9/2006- )
Anderson No Publications
Maurer, L**
(9/2006- )
Mosher No Publications
Powers, GL*
(9/2006- )
Alarid Valley CC, Solodin NM, Ellison SJ, and Powers GL, and Alarid, ET. (2007). Temporal variation in estrogen receptor-alpha turnover in the presence of estrogen. In revision.
Trinh, T*
(9/2006- )
Tibbetts

Shi Y, Dodson GE, Mukhopadhyay PS, Shanware NP, Trinh AT, and Tibbetts RS. (2007). Identification of carboxyl-terminal MCM3 phosphorylation sites using polyreactive phosphospecific antibodies. J Biol Chem. 282:9236-9243. PMID 17244605

Shanware NP, Trinh AT, Williams LM, and Tibbetts RS. (2007). Coregulated ataxia telangiectasia-mutated and casein kinase sites modulate cAMP-response element-binding protein-coactivator interactions in response to DNA damage. J Biol Chem. 282:6283-6291.  PMID 17209043

Kumar S, Dodson GE, Trinh A, Puchalski JR, and Tibbetts RS. (2005). ATR Activation Necessary but not Sufficient for p53  Induction and Apoptosis in Hydroxyurea-hypersensitive Myeloid Leukemia Cells. Cell Cycle. 4:1665-1668. 

Vokoun, C*
(9/2006- )
Basso No Publications
Capes, D.**
(9/2007-)
Rotating No Publications
Esquibel, J*
(9/2007-)

Rotating No Publications
Huang, C*
(9/2007-)

Rotating No Publications
McCool, K**
(9/2007-)

Miyamoto No Publications
Meline, B
(9/2007-)

Rotating No Publications
Morlock, E*
(9/2007-)

Rotating

No Publications

Palte, M**
(9/2007-)

Raines

No Publications

Peterson, A**
(9/2007-)

Rotating No Publications
Shehan, T
(9/2007-)

Rotating No Publications

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