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Molecular and Cellular Pharmacology Student Seminars 2004-2005
Aude S. Ada-Nguema
Keely Lab
Monday, September 13, 2004
12:00 Noon
140 Bardeen
The Small GTPase R-Ras Increases Cell spreading by Activating
Phospholipase C and Modulating Intracellular Calcium and
the Actin Cytoskeleton
Aude S. Ada Nguema and Patricia J. Keely
Molecular and Cellular Pharmcaology Program and the Department
of Pharmacology
University of Wisconsin-Madison, Madison, Wisconsin 53706
R-ras, an atypical member of the Ras subfamily of small
GTPases, has been shown to strengthen integrin-mediated
adhesion through an unknown mechanism. Our primary research
goal is to decipher the signal transduction pathways that
connect R-ras activation to integrins. Using total internal
fluorescence (TIRF) microscopy of dye loaded MCF10A cells
stably transfected with a constitutively active R-ras (R-Ras38V)
isoform or a control vector, we found that the cell edge
dynamics of the control and R-ras cells were distinct. Control
cells spread by alternating membrane extension and retraction
events from the beginning of cell spreading, reaching a
maximum spreading area of 400 _m2 within 30 minutes. However
R-ras38V cells continuously extend their membrane with few
retraction events, leading to a maximum spread area of 800-1500
_m2. Besides spreading faster, R-ras cells also had an extended
spreading time. The difference in the mechanism of cell
spreading between these two cells types strongly correlated
with the type of actin-mediated membrane protrusions that
drove cell spreading. Control cells spread using filopodia
whereas R-ras cells spread using lamellipodia as shown by
TIRF and actin cytoskeleton staining. The mechanism of R-ras
spreading was switched to be like control cells by serum-starving
the cells overnight prior to analysis, indicating that R-ras
signaling alone is not sufficient to mediate the changes
in cell spreading. Furthermore inhibiting PLC or chelating
internal calcium also switched the mechanism by which R-ras
cells spread, and reduced the formation of subsequent focal
adhesions. A role for PLC downstream of R-ras signaling
was further supported by the finding that R-ras directly
interact with one of the PLC isoforms, PLC-_. Overall, our
data suggest that R-ras enhances integrin function by maximizing
the areas of contact between the cell and the ECM through
the activation of PLC, the mobilization of internal calcium
stores and the regulation of the actin cytoskeleton.
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Xiao-Fan Wang, PhD
Professor, Department of Pharmacology and Cancer Biology,
Duke University Medical Center
Tuesday, September 14, 2004
12:00 Noon
Biotechnology Center Auditorium
425 Henry Mall
Novel Players in Tumor Metastasis
For additional information, please contact Student Host Sujatha
Venkataraman, svenkatarama@wisc.edu.
Note to Graduate Students: There will be a Graduate Student
Lunch with Dr. Wang following his seminar in the Pharmacology
Conference Room, 3765 MSC. |
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Beth Chang
Miyamoto Lab
Monday, September 20, 2004
12:00 Noon
140 Bardeen
NF-kB Super-Induction: An NF-kB Memory Pathway Mediated
via the Exchange of NF-kB Dimer Subunits
The NF-kB family of transcription factors regulates various
physiological and developmental processes. The transcriptional
activity of NF-kB can self-regulate via controlling the expression
of its family members. With the exception of p65, all of the
NF-kB family members (c-Rel, RelB, p52 and p50) contain at
least one NF-kB binding site (kB site) within their promoter
regions. Thus, previous activation of NF-kB could lead to
changes in the levels of different NF-kB protein expression
and associated changes in biological readouts. We have identified
a phenomenon termed "NF-kB super-induction" where
an initial NF-kB activating event results in increased NF-kB
DNA binding activity to selective kB sites when a second stimulus
is applied. My studies to determine the mechanism of super-induction
indicate that super-induction occurs through an NF-kB and
Elf-1 dependent transcription of p50. The increased levels
of p50 in turn exchange the pre-existing NF kB dimers into
p50-containing dimers. A second NF-kB stimulus applied at
this point activates these p50-containing dimers. Moreover,
in the context of certain leukemia cell lines exposed to anti
cancer agents, p50 containing dimers caused heightened expression
of certain NF-kB regulated genes, such as cell cycle regulators
(e.g. p21) resulting in super-survival of these malignant
cells. My studies thus suggest that the super-induction phenomenon
represents an NF-kB memory pathway in which an initial NF-kB
activating event results in augmented response to second NF-kB
stimuli in a gene-selective fashion through the increased
expression of the p50 NF-kB subunit. These findings further
suggest that auto-regulatory induction of specific NF-kB subunits
provides a mechanism for diversification and/or amplification
of NF-kB regulated biological responses. |
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Ashley Doan
Huttenlocher Lab
Monday, October 4, 2004
12:00 Noon
140 Bardeen
Characterization of RACK1, a Regulator of Cell Adhesion
and Migration
RACK1 is an adaptor protein that binds to and regulates signaling
via Src and PKC-dependent pathways. Elevated levels of rack1
mRNA has been demonstrated in non-small cell lung, colon,
and breast carcinoma cells compared to normal tissue. Thus
identification of the function of RACK1 and its regulation
in normal and tumor cells appears to be essential to evaluate
oncogenic or tumor-suppressor potential. I have evaluated
the roles of paxillin as a potential downstream effector of
RACK1 in the regulation of adhesions and cell migration. Subsequently,
I would also like to elucidate the role of RACK1 in modulating
cell-cell contact and metastasis in breast epithelial cells.
Our previous studies demonstrated that RACK1 modulates cell
migration and adhesion complex organization through its interaction
with Src. We now show that down-regulation of RACK1 using
siRNA increases the random and haptotactic migration of fibroblast
cell lines, suggesting that endogenous RACK1 acts as a negative
regulator of cell migration. We have evidence to suggest that
paxillin is an important target downstream of RACK1 that regulates
adhesion complex dynamics and cell migration. Together, our
findings suggest that RACK1 may be playing a role in adhesion
complex dynamics and cell migration by modulating Src-mediated
phosphorylation of the focal adhesion protein, paxillin. |
Jaehyung (Gus) Cho
Mosher Lab
Monday, October 18, 2004
12:00 Noon
140 Bardeen
Deposition of Fibronectin and Its N-terminal 70-kD Fragment
on Platelets Spread on Fibrin Matrices: Chracteristics,
Controlling Molecules, and Its Receptor
Fibronectin (FN) is a dimerized glycoprotein of 230-250-kD
subunits that is present in a soluble form in plasma and
other body fluids and in an insoluble form in tissues. FN
in tissues mediates integrin-supported cell adhesion and
migration and has been implicated in a variety of cellular
processes that underlie embryogenesis, wound healing, oncogenic
transformation, and inflammation. A role of FN for platelet
function, however, remains to be determined. Recently, in
vivo studies of mice lacking plasma FN or fibrinogen suggested
that pFN plays a role in the formation of stable thrombi.
We investigated the effect of fibrin matrices on platelets
adhesion and spreading and on platelet-mediated FN assembly.
Antibody-blocking studies indicated that static adhesion
of platelets to fibrinogen or fibrin matrix is via avb3
and aIIbb3 integrins and to FN or FN-fibrin matrix (fibrin
containing covalently crosslinked FN) is via avb3 and a5b1
integrins. More platelets adhered to FN-fibrin matrix than
to fibrin matrix. Fluorescein isothiocyanate-labeled FN
(FITC-FN) was deposited into fibrillar arrays by platelets
spread on FN or fibrin matrices but not by platelets spread
on fibrinogen. Scatchard analysis indicated that 4,500-7,000
FN molecules bound per spread platelet over 1 hr with a
Kd of 4-5 nM. FITC-labeled N-terminal 70-kD fragment of
FN bound to spread platelets in a pattern similar to FN
deposition. Linear arrays of 70K fragment but not FN assembly
was extracted by deoxycholate. However, in the presence
of a cross-linker, arrays of 70K resisted detergent extraction,
indicating that 70K fragment was crosslinked to binding
molecules. Platelet morphology and FITC-FN deposition were
disturbed by treatment of platelets with cytochalasin B
or anti-avb3. Tyrosine phosphorylation of intracellular
proteins, including focal adhesion kinase, was enhanced
in platelets spread on FN or fibrin matrices as compared
to platelets spread on fibrinogen. These results indicate
that FN assembly by spread platelets is regulated by integrin
interaction with components of provisional matrices, remodelling
of actin cytoskeleton and signaling events. FN assembly
by platelets interacting with fibrin matrices likely stabilizes
platelet plugs at sites of injury.
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Hogune Im
Bresnick Lab
Monday, October 25, 2004
12:00 Noon
140 Bardeen
Dissecting the Activation of Gata-1-Dependent Endogenous Murine
b-Globin Locus
Defining factors and signals that establish and maintain the
native nucleoprotein structure of endogenous chromatin domains
represents a powerful approach for elucidating transcriptional
mechanisms. In adult erythroid cells, the locus control
region (LCR) and the adult b-globin genes of the murine b-globin
locus are highly enriched in acetylated histones H3 and H4
and H3 methylated at lysine 4 (H3-meK4). By contrast,
the embryonic b-globin genes reside in a broad region of reduced
acetylation. Histone H3 methylated at lysine 79 (H3-meK79)
is highly enriched at the adult b-globin genes, but not at
the LCR. To identify molecular steps in b-globin transcriptional
activation, genetic complementation experiments were conducted
in GATA-1-null, G1E cells containing an estrogen receptor
hormone binding domain-GATA-1 fusion protein (ER-GATA-1).
Kinetic analysis of ER-GATA-1 occupancy of chromatin and establishment
of the histone modification pattern by chromatin immunoprecipitation
(ChIP) revealed that GATA-1 occupies multiple regions within
the LCR prior to the bmajor promoter. Chromatin accessibility
at the promoter was low until ER-GATA-1 assembled into regulatory
complexes at the LCR. Subsequently, ER-GATA-1 accessed
the bmajor promoter, induced histone H3 acetylation, RNA polymerase
II recruitment, and elevated H3-meK79 levels. Blocking
transcriptional elongation did not erase H3-meK79, indicating
that maintenance of H3-meK79 does not require ongoing elongation.
Analysis of N-terminal GATA-1 deletion mutants resembling
truncated GATA-1 polypeptides expressed in megakaryoblastic
leukemia, which retain Friend of GATA-1 (FOG-1) binding and
DNA binding activities, revealed that FOG-1 binding and DNA
binding activities are defective in polymerase recruitment.
These results support a model in which acquisition of transcriptional
competence requires establishment of H3-meK4, which is GATA-1-independent.
ER-GATA-1 binding to the LCR increases histone H3 acetylation
at the promoter as an early event in transcriptional activation,
which is tightly coupled to increased promoter accessibility
and polymerase recruitment. Increased promoter accessibility
permits ER-GATA-1 access to the promoter, which precedes maximal
induction of H3-meK79, a late event in activation. Given
the dynamic regulation of H3-meK79 by GATA-1 and NF-E2 and
the modulation of H3-meK79 levels during erythropoiesis, we
propose that H3-meK79 is a crucial signal that controls the
rate of b-globin transcription. Studies are underway to dissect
mechanisms underlying the requirement of N-terminal sequences
of GATA-1 for chromatin modification. As the N-termini
of GATA factors differ considerably, one might expect these
divergent sequences to establish GATA factor-specific functions. |
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Katarzyna Modzelewska
Keely Lab
Week of November 1, 2004
Ack-1 regulates Cdc42 induces integrin-mediated cell migration
through a signaling complex with p130Cas, FAK and Src
Activation of Cdc42, a member of the Rho family of small GTPases,
promotes integrin-mediated migration and invasion of breast
epithelial cells across collagen matrices (Keely et al, 1997.
Nature 390: 632). To elucidate the molecular basis for the
effects of Cdc42, we tested whether Cdc42 regulates integrin
signaling pathways that lead to cell migration. We found
that Cdc42 is a necessary component of the a2b1 integrin signaling
pathway leading to p130Cas phosphorylation, since activated
Cdcd42(61L) lead to enhanced and dominant negative Cdc42 (17N)
blocked p130Cas phosphorylation. Additionally, Cdc42
activation occurred downstream of the a2b1 integrin, indicating
it is a direct component of this signaling pathway.
Signaling from Cdc42 to p130Cas and FAK was functionally relevant,
since the SH3 domain of p130Cas and FRNK, which function as
a dominant negatives of the corresponding molecules, blocked
Cdc42-induced cell migration. In addition, both FAK
and p130Cas can be immunoprecipitated with Cdc42 in a collagen
dependent manner. Moreover, we find a role for the Cdc42
effector, the tyrosine kinase Ack-1. Ack-1 interacts
with the beta1 integrin and becomes tyrosine phosphorylated
following collagen stimulation. This phosphorylation is dependent
on both Src and FAK kinases. Overexpression of either wild-type
or kinase dead Ack-1 constructs enhanced Cdc42-induced migration,
suggesting a role for Ack-1 in regulating cell migration.
Both wild type and kinase dead Ack-1 enhanced p130Cas phosphorylation,
with wild type being more potent. Finally, we find evidence
for a signaling complex between Ack-1, p130Cas, FAK and Cdc42.
Importantly, the formation of this complex was collagen-dependent,
even in Cdc42(12V)-expressing cells. Our results suggest
a signaling pathway downstream of the a2b1 integrin by which
collagen stimulates the activation of Cdc42, the phosphorylation
of Ack-1, and their association with p130Cas and FAK.
These signaling events ultimately lead to cell migration. |
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Misuk Kang
Walker Lab
Department of Physiology and Molecular and Cellular Pharmacology
Training Program
Monday, November 8, 2004
12:00 Noon
140 Bardeen
Correlation of cardiac contractile function with translocation
of novel PKC isoforms in adult ventricular myocytes
In order to examine cardiac contractile regulation and protein
kinase C (PKC) translocation in parallel, the d- and e-isoforms
of PKC were fused to green fluorescent protein (GFP) and expressed
in adult rat ventricular myocytes maintained in short term
culture. PKC-d-GFP and PKC-e-GFP were predominantly
cytosolic until phorbol dibutyrate (PDBu) was introduced.
PKC-e-GFP redistributed preferentially to the surface sarcolemma,
whereas PKC-d-GFP redistributed preferentially to perinuclear
structures that co-localized with a Golgi marker. Similar
translocation preferences were observed in human embryonic
kidney (HEK 293) cells, a non-cardiac cell type with a distinct
morphology. Myocyte contractile function was assessed
by monitoring twitch shortening with field stimulation at
0.5 Hz, 22oC. In PKC-e-GFP expressing myocytes, PDBu
caused a 40% decrease in twitch amplitude that paralleled
accumulation at the surface sarcolemma, but this response
did not differ from myocytes expressing GFP alone. In
PKC-d-GFP myocytes, PDBu caused a transient negative inotropic
response followed by a robust, sustained and bis-indoylmaleimide
(BIM)-sensitive positive inotropic response that paralleled
perinuclear PKC-d accumulation. PKC-e-GFP myocytes at
higher expression levels responded more like PKC-d-GFP myocytes
including perinuclear accumulation and a sustained and BIM-sensitive
positive inotropic response. Conversely, PKC-d-GFP myocytes
behaved more like PKC-e-GFP myocytes when stimulated with
phorbol 12-myristate-13-acetate (PMA, a more hydrophobic phorbol
ester) including PKC-d-GFP accumulation at the surface sarcolemma
and an attenuated positive inotropic response. The data
suggest that these novel PKC isoforms have little effect on
contractile function when accumulating at the cell surface,
but produce strong positive inotropic responses upon accumulation
at intracellular sites. |
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Paul Nuzzi
Huttenlocher Lab
Monday, November 15, 2004
12:00 Noon
140 Bardeen
The Role of Calpain-II in Neutrophil Polarization and
Chemotaxis
Neutrophil migration and chemotaxis are critical steps involved
in innate immunity and the development of inflammation. The
ability of neutrophils to migrate within a shallow gradient
of chemoattractant requires a dynamic system with tight regulation
and specific localization of intracellular proteins. In our
previous work we demonstrated that calpain inhibition induced
neutrophil adhesion, polarization and rapid chemokinesis in
the absence of exogenous activators, while disrupting neutrophil
chemotaxis and directional persistence in a gradient of IL-8
and fMLP. In this study we further characterize the role of
calpain in regulating neutrophil migration and examined isoform
specificity. Using RT-PCR and Western blot analysis we show
that neutrophils express both calpain-1 and calpain-2 isoforms
with calpain-1 as the more abundant isoform. Upon IL-8 or
fMLP stimulation, immunofluorescence microscopy shows an asymmetric
redistribution of the two isoforms with calpain-2 localization
at the leading edge and calpain-1 localized to the rear. Biochemical
analysis indicates that upon activation each isoform also
partitions into distinct cellular fractions, with calpain-2
localized to lipid rafts. To examine the importance of this
asymmetry, HL-60 cell lines over- expressing wt and proteolytically
dead calpain-2 were examined for effects on polarization and
chemotaxis. Over-expression of calpain-2 resulted in an increase
in chemotactic response over control, while over-expression
of the proteolytically dead calpain-2 abrogated chemotaxis.
This suggests that the two ubiquitous isoforms of calpain,
calpain-1 and 2, have distinct distribution and functions
during neutrophil motility and suggests an essential role
for calpain-2 in neutrophil chemotaxis. |
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Haichuan Duan
Jefcoate Lab
Monday, December 13, 2004
12:00 Noon
140 Bardeen
Post-transcriptional Regulation of the Steroidogenic Acute
Regulatory Protein (StAR) mRNA
The steroidogenic acute regulatory protein (StAR) mediates
cholesterol import from outer to inner mitochondrial membrane,
a rate-limiting step for steroid hormone biosynthesis. Two
major polyadenylation sites give rise to two StAR mRNA forms
(1.6kb and 3.5kb) differing only within their 3' untranslated
regions (3'UTR). AU-rich Elements (AURE) which mediate fast
degradation and selective stabilization of many cytokine transcripts
are found at the 3' end of the 3.5kb StAR mRNA. We are looking
at the post-transcriptional regulation of StAR transcripts
and have found that the long but not the short 3'UTR contain
destabilizing sequences. At least two elements are found to
be involved in the destabilization, one nonspecific tract
and AURE, which is specific for steroidogenic cells. TIS11b,
a member of the CCCH tandem zinc finger family of RNA binding
proteins which destabilize AURE-containing mRNAs, is rapidly
induced in steroidogenic cells after cAMP-PKA stimulation
and precedes further downregulation of StAR transcripts. We
found that TIS11b selectively targets wild-type but not mutant
StAR AURE through cotransfection assays. Taken together, we
hypothesize that StAR mRNA half-life is kept low by a nonspecific
degradation pathway but can be quickly changed through proteins
interacting with AURE during stimulation. |
Reema Jasuja
Greenspan Lab
Monday, January 24, 2005
12:00 Noon
140 Bardeen
EXTRACELLULAR REGULATION OF BMP SIGNALING BY PRODOMAIN OF
BMP-1 AND CHORDIN
Signaling by bone morphogenetic proteins (BMPs) plays central
roles in early embryonic patterning, organogenesis and homeostasis
in a broad range of species. Chordin, an extracellular
antagonist of BMP signaling, is thought to readily diffuse in
tissues, thus forming gradients of BMP inhibition that result
in reciprocal gradients of BMP signaling. The latter determine
cell fates along the embryonic dorsoventral axis. The secreted
protease BMP-1, originally identified from bone extracts along
with other TGF-_ like BMPs is thought to help shape BMP signaling
gradients by proteolytically processing chordin and thereby
enhancing BMP signaling. BMP-1 is synthesized with an N-terminal
prodomain that is removed by furin-like proprotein convertases,
presumably activating the protease. Interestingly, all characterized
peptide sequences for the form of BMP-1 that co-purify with
TGFb-like BMPs in osteogenic fractions are from the prodomain
region. To gain more insight into possible functional roles
for the BMP-1 prodomain in vertebrates, we have evaluated the
proteolytic activity and the binding properties of a furin site-mutated
form of ProBMP-1 (ProBMP-1SQQ), that retains its prodomain sequence.
We found that ProBMP-1SQQ is efficiently expressed and secreted.
We have shown that ProBMP-1SQQ binds to TGFb-like BMPs while
the mature BMP-1 does not. This interaction is direct and specific
as it cannot be competed away with excess of unrelated growth
factors. BMP-2, which is structurally and functionally similar
to BMP-4 can compete with BMP-4 for binding to ProBMP-1SQQ .
ProBMP-1SQQ can also alter the BMP-4 signaling in cultured cells.
In another project, we show that mammalian Chordin binds heparin
with an affinity similar to that of factors known to functionally
interact with heparan sulfate proteoglycans (HSPGs) in tissues.
We further demonstrate that Chordin binding in mouse embryonic
tissues is dependent upon its interaction with cell surface
HSPGs and that Chordin binds to cell surface HSPGs (e.g. syndecans).
Also, Chordin-HSPG interactions strongly potentiate the antagonism
of BMP signaling by Chordin and are necessary to the retention
and uptake of Chordin by cells. |
Yukiko Muroi
Jackson Lab
Monday, January 31, 2005
12:00 Noon
140 Bardeen
Fluorescence probing of conformational transitions in the extracellular
domain of the GABAA receptor
Rapid synaptic transmission is mediated by ligand gated channels
that bind ligand and undergo conformational transitions to
open and desensitized states. To investigate the structural
nature of these transitions we introduced cysteine residues
at selected locations in the GABAA receptor. Wild-type and
mutant a1b2 receptors were expressed in Xenopus oocytes, and
the introduced cysteines were labeled with the environment-sensitive
fluorophores, Alexa Fluor 546 C5 maleimide (Molecular Probes),
sulforhodamine methanethiosulfonate (MTSR), and tetramethylrhodamine-maleimide
(TMRM). Combined voltage-clamp and fluorescence measurements
revealed GABA-induced fluorescence changes occurring simultaneously
with GABA-induced current. Fluorescence changes and current
both increased with the concentration of GABA. In receptors
labeled at a1L127C, receptor activation was accompanied by
an increase in fluorescence. This suggests that the side chain
of this residue moves from a hydrophilic to a hydrophobic
environment when the receptor is activated. In receptors labeled
at the homologous site of the b2-subunit (L125C), receptor
activation was accompanied by a similar increase. In the a-subunit,
this site is near the GABA binding region, but in the b-subunit
this site is far away from regions directly engaged in agonist
binding. Thus, a global change in receptor structure probably
contributes to the fluorescence changes in these labels. Labels
at residue a1E122C or b2P120C report a fluorescence decrease
in response to GABA. Thus, residues 122 and 127 of the a-subunit,
which reside in b strand 5` and 6 in the extracellular domain
of the GABAA receptor, undergo opposite changes in environment
polarity during the gating of the channel. |
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Frontiers in Pharmacology Spring 2005 Schedule
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Siobhan Wilson
Keely Lab
Monday, February 7, 2005
12:00 Noon
140 Bardeen
R-Ras Activity Affects Adherens Junction Formation in Mammary
Epithelial Cells
R-Ras is a member of the Ras superfamily of small GTPases,
which act as molecular on/off switches for intracellular signaling
pathways. R-Ras shares ~55% identity with classical
Ras proteins H-, N-, and K-Ras (1), and has a unique 26-amino
acid N-terminal extension (2). Activation of R-Ras disrupts
ductal morphogenesis of mammary epithelial cells (MECs) in
3D collagen gels and enhances cell migration (3,4).
We show here that constitutive activation of R-Ras causes
a decrease in adherens junction (AJ) formation and corresponding
increase in focal adhesions (FAs). R-Ras inhibits AJ
formation to a greater extent on collagen than on fibronectin,
suggesting that R-Ras disrupts AJs by affecting a collagen
receptor. It has been shown previously that R-Ras enhances
adhesion through the a2b1 integrin, a collagen and laminin
receptor (4). The a2b1 integrin not only mediates MEC
polarization and tubulogenesis in 3D collagen matrices, it
also mediates haptotactic migration on collagen (5,6,7).
Because the a2b1 integrin can mediate these two opposing phenotypes,
regulation of a2b1 integrin is likely important in epithelial
vs. mesenchymal phenotype choice made by MECs in response
to the extracellular matrix (ECM). We find that inhibition
of the a2b1 integrin through addition of a blocking antibody,
P1E6, causes a partial rescue of AJ formation on collagen
but not fibronectin. In addition, E-cadherin co-immunoprecipitates
with the a2b1 integrin in control cells, but not in cells
overexpressing activated R-Ras. These data suggest that
R-Ras disrupts adherens junctions in mammary epithelial cells
through its effects on the a2b1 integrin, likely through increasing
cell-substratum adhesion.
(1) Self, A.J., H.F. Paterson, and A. Hall. Oncogene,
1993. 8(3):655-61.
(2) Lowe, D.G., et al. Cell, 1987. 48(1):137-46.
(3) Keely, P.J., et al. Journal of Cell Biology, 1999.
145(5):1077-88.
(4) Kwong, L., et al. Molecular and Cellular Biology,
2003. 23(3):933-49.
(5) Berdichevsky, F., et al. Journal of Cell Science,
1992. 102(Pt 3):437-46.
(6) Chen, J., et al. American Journal of Pathology,
2002. 161(1):337-44.
(7) Zutter, M.M., et al. Molecular Biology of the Cell,
2001. 12(S):8-9a. |
Shreeya Jayaraman
Kamp Lab
Monday, February 14, 2005
12:00 Noon
140 Bardeen
Isolation and Characterization of Ventricular Myocytes Derived
from Human Embryonic Stem Cells using IRX4
Human embryonic stem cells (hESCs) are pluripotent cells derived
from the inner cell mass of the blastocyst. These cells have
the potential to differentiate into cells from all three embryonic
germ layers. We are particularly interested in their differentiation
into cardiac myocytes (CMs). CMs can be distinguished in a population
of differentiating hESCs as spontaneously contracting areas
(beating areas) that can be isolated by microdissection. However,
this method has limitations, in that it is practically impossible
to isolate cardiac tissue specifically, and also, it is not
possible for us to isolate a particular subtype of cardiac cells.
The human heart has four chambers (two atria and two ventricles).
Atrial and ventricular myocytes are very different in both their
morphology and functional characteristics (defined by their
action potentials). The Sinoatrial (SA) node present in the
right atrium consists of nodal cells that set the pace for cardiac
contraction and thus act as the pacemaker for the heart. These
nodal cells are very different in their morphology and functional
characteristics from both atrial and ventricular myocytes. Previous
work from our lab has shown that beating areas in differentiating
populations of hESCs show characteristics of atrial, ventricular
and nodal cardiac cells. IRX4 is a homeobox protein that labels
ventricular progenitor cells in the cardiac crescent in vertebrates.
Previous work has shown that Irx4 is expressed in ventricular
progenitor cells in the mouse, and its expression in the ventricular
myocardium persists into adulthood. We propose to use IRX4 as
a marker of ventricular myocytes in a population of differentiating
hESCs. We will isolate these cells and characterize them using
RT-PCR, immunostaining and functional studies (measurement of
action potential).
References:
Regulation of Chamber-Specific Gene Expression in the Developing
Heart
by Irx4. Bao et al, Science 1999 Feb;283:1161-4.
Homologous recombination in human embryonic stem cells. Zwaka
& Thomson,
Nat Biotechnol. 2003 Mar;21(3):319-21. |
Hyun-Jung Kim
Svendsen Lab
Monday, February 21, 2005
12:00 Noon
140 Bardeen
Nurr1 and proneural bHLH proteins produce TH+ neurons in midbrain
progenitor cells
Hyun-Jung Kim1,3, Mychia Sugimori2, Masato Nakafuku2,
Clive N. Svendsen3
1Program of Molecular and Cellular Pharmacology, University
of Wisconsin-Madison, 2Cincinnati Children's Hospital Medical
Center, Cincinnati, OH 45229-3039, USA, 3Waisman Center and
Department of Anatomy, University of Wisconsin-Madison, WI 53705
We have previously shown that neural progenitor/stem cells isolated
from different regions of the developing brain and grown as
aggregates termed neurospheres (NS) are regionally specified.
Those derived from forebrain regions such as the striatum (NSStr)
proliferate faster and generate more neurons than those from
midbrain regions such as the ventral mescencephalon (NSVM).
To establish whether factors released NSStr could increase neurogenesis
from NSVM, conditioned media exchange experiments were performed.
The results showed that conditioned media from each type of
neurosphere had no effect on neurogenesis, excluding the possibility
of differential expression of soluble neuronal inducing factors
being released by regionally derived stem cells. To examine
the regional specific role of cell-cell contact during expansion
and differentiation, NSVM were infected with a viral construct
to express GFP and co-cultured with NSStr as hybrid-spheres.
Again, there was no induction of neurogenesis in the NSVM following
co-culture suggesting that increased neurogenesis may be the
result of intrinsic mechanisms rather than membrane bound or
released factors. We next decided to see the role of bHLH proteins
and Pax6 which are believed to be involved in cell fate determination.
Primary VM tissue expressed Pax6, Mash1, Ngn1 and Ngn2 but not
Ngn3. In contrast, primary striatal tissue expressed only
Pax6, Mash1 and Ngn2. In vivo expression of these proteins
was confirmed by immunohistochemistry in E12, E13, and E14 rats.
Following expansion NSVM lost the expression of all Ngns. To
address the functional role of these proteins, VM cells and
STR cells were transduced with retrovirus which contains each
of ngn1, ngn2, mash1 and pax6. Neurogenesis of NSVM and NSStr
was increased by overexpression bHLH proteins such as Mash1,
Ngn1 and Ngn2.Nurr1 is a steroid/thyroid hormone receptor and
known to activate tyrosine hydroxylase (TH) by direct binding
to TH promoter in vitro. Most of TH positive dopaminergic neurons
were positive for Nurr1 in vivo. Overexpression of Nurr1 induced
TH in concentration dependent manner. However, cells expressing
TH by Nurr1 were negative for neuronal marker. Combined forced
expression of Nurr1 with bHLH proteins generated TH positive
neurons.
Ostenfeld,T., Joly,E., Tai,Y.T., Peters,A., Caldwell,M., Jauniaux,E.,
and Svendsen,C.N. (2002). Regional specification of rodent and
human neurospheres. Brain Res.Dev.Brain Res. 134, 43-55.
Nieto,M., Schuurmans,C., Britz,O., and Guillemot,F. (2001).
Neural bHLH genes control the neuronal versus glial fate decision
in cortical progenitors. Neuron 29, 401-413. |
Frontiers in Pharmacology Seminar
Biotechnology Center Auditorium
Tuesday, February 22, 2005
12:00 Noon
425 Henry Mall
Mark A. McNiven, PhD
Professor and Chair
Department of Biochemistry and Molecular Biology
Cell Biology Program Director
Mayo Cancer Center
Seminar Title: Membrane-Cytoskeletal Dynamics in
the Metastatic Process
For additional information, please contact Chateen Carbonara,
ccarbonara@wisc.edu,
262-7436. NOTE TO MOLECULAR AND CELLULAR PHARMACOLOGY GRADUATE STUDENTS:
There will be a student lunch with Dr. McNiven following his
seminar in the Pharmacology Conference Room, 3765 MSC. |
Mike Gonzales
Anderson Lab
Monday, February 28, 2005
12:00 Noon
140 Bardeen
Nuclear Signaling by the type I Phosphatidylinositol 4-Phosphate
Kinase a
Mike Gonzales and Richard A. Anderson.
Phosphatidylinositol 4-Phosphate Kinase a (PIPKIa) is a member of a family
of PIP kinases that utilize Phosphatidylinositol 4-phosphate
(PI4P) to generate the signaling molecule phosphatidylinositol
4,5-bisphosphate (PIP2). PIP2 or PIP2 derived 2nd messengers
can regulate a host of cellular functions, including endo- &
exocytosis, vesicular trafficking, cell motility, adhesion,
and cytoskeleton assembly & disassembly. Signaling specificity
for each of these events is determined by tightly regulating
the spatial production of PIP2 in the cell. This is achieved
by the subcellular targeting of the Kinases that generate PIP2.
We have shown that PIPKIa can be found in the nucleus of cells,
more specifically at nuclear speckles, which are storage sites
for pre-mRNA splicing molecules. This suggests a role
for PIPKIa and PIP2 production in
the regulation of mRNA splicing. Indeed we have found
that knockout of PIPKIa by RNA interference
causes a reduction of PIP2 levels in the nucleus affects the
phosphorylation state of SR proteins, a family of mRNA splicing
factors. The SR proteins are a family of splicing factors
which are required for both constitutive and alternative mRNA
splicing. Their phosphorylation state is directly liked
to their ability to promote pre-mRNA splicing in vivo.
Knockout of PIPKIa by RNA interference
dramatically reduces the phosphorylation of SR proteins as detected
by the mAb104 phosphoepitope. This data suggests that
nuclear PIPKIa or the PIP2 it generates
is required for the regulation of SR protein phosphorylation
and therefore efficient pre-mRNA splicing. |
**************************************************************************
There is no Frontiers in Pharmacology Seminar scheduled
for Tuesday, March 1, 2005. ************************************************************************** |
Matt Marengo
Wassarman Lab
Monday, March 7, 2005
12:00 Noon
140 Bardeen
Signaling Through TAF1 Alternative Splicing in Drosophila
We are interested in understanding how the TAF1 subunit of the
general transcription factor TFIID contributes to transcriptional
activation. TFIID serves three major roles during transcriptional
activation. It acts as a transcriptional coactivator by binding
transcription factors, it binds promoter sequences, and it post-translationally
modifies histones to modify chromatin structure. Ten years
ago, TFIID was largely thought to be a static, unregulated complex.
However, recent studies have made it clear that TFIID composition
is regulated, and different TFIID complexes regulate the transcription
of different genes. TAF1 is an evolutionarily conserved protein
that plays a key role in TFIID function. In Drosophila
melanogaster, there is a single TAF1 gene, but the TAF1 mRNA
is alternatively spliced to encode four TAF1 protein isoforms.
Preliminary data indicate that the isoforms are differentially
expressed in Drosophila tissues and in response to cell stress
events. We have observed this splicing at the mRNA level by
RT-PCR and at the protein level by analysis of a tagged mini-gene.
We have made stable cell lines that overexpress TAF1 isoforms,
which we will use to test the hypothesis that inclusion of alternate
TAF1 isoforms alters the transcriptional activity of TFIID at
specific genes. **************************************************************************
Gennifer Mager
Svaren Lab
Monday, March 7, 2005
12:00 Noon
140 Bardeen
Nab2 represses Transcription by recruiting the Nucleosome
Remodeling and Deacetylase Complex
The EGR2/Krox-20 transcriptional activator plays a critical
role in vertebrate hindbrain development and in peripheral
nerve myelination. Our previous studies revealed that EGR2
expression in Schwann cells regulates genes for a number of
myelin proteins, as well as genes involved in the lipid/cholesterol
synthesis required for myelin formation. Recently, several
independent mutations have been associated with human peripheral
neuropathies. One such mutation highlights the importance
of regulation of EGR2 activity by the NAB1 and NAB2 (NGFI-A/EGR1-binding)
corepressors, which are recruited to EGR2 target promoters
by direct interaction with EGR2. Using protein interaction
assays, we have found that NAB2 interacts with the CHD4 (Chromodomain
Helicase DNA-binding protein 4) subunit of the NuRD (Nucleosome
Remodeling and Deacetylase) chromatin remodeling complex,
and dominant negative mutants of CHD4 have revealed that NAB2
represses via interaction with the NuRD complex. In addition,
we have also characterized the domains required for interaction
between NAB2 and CHD4. This unexpectedly revealed that EGR2
activity is modulated by at least two repression domains within
NAB2, one of which uniquely requires interaction with CHD4
in order to repress transcription. Finally, the interaction
with CHD4 is regulated by alternative splicing of the NAB2
mRNA. Overall, our studies provide the first evidence implicating
a chromatin remodeling complex in the transcriptional regulation
of the myelination program in Schwann cells. |
Sujatha Venkataraman
Tibbetts Lab
Monday, March 14, 2005
12:00 Noon
140 Bardeen
Abstract:
The DNA synthesis inhibitor hydroxyurea (HU) is an antineoplastic
agent most commonly used in the treatment of chronic myelogenous
leukemia. HU induces apoptosis in a cell-type dependent manner;
with the cells of hematopoietic origin typically demonstrating
heightened sensitivity. The mechanisms through which HU elicits
cytotoxicity in leukemia cells are not well characterized. We
have employed a human myeloid leukemia cell line (ML-1) as a
model system to investigate the mechanisms of HU-induced apoptosis.
We demonstrated that ML-1 cells are remarkably sensitive to
HU relative to other leukemic cell lines. Features of apoptosis,
including membrane blebbing, phopshatidylserine translocation,
PARP cleavage, and nuclear condensation appeared approximately
4 h after HU treatment. We found that HU induced p53 in ML-1
cells but not HU-resistant Molt-3 cells, and that p53 accumulation
required the ATR protein kinase. Interestingly, HU-induced apoptosis
was delayed by the microtubule inhibitor Nocodazole, suggesting
that premature mitosis, or another microtubule-dependent event
might underlie HU hypersensitivity. Consistent with this notion,
ML-1 cells showed apparent defect in the expression of Checkpoint
kinase 1(CHK1) protein kinase, which is required for the suppression
of mitosis and for replication fork stabilization in response
to replication stress. CHK-1-depedent degradation of Cdc25A
phosphatase in response to HU was also defective in ML-1 cells
indicating that Chk1 function is, in fact, compromised. Although
we did not detect obvious signs of premature mitosis in HU-treated
ML-1 cells, the results are consistent with a model whereby
CHK1 insufficiency contributes to apoptosis through a microtubule-dependent
event. ML-1 cells may be a useful model system for delineating
the steps of HU-induced apoptosis, and for studying the impact
of checkpoint inhibitors on cellular sensitivity to this drug. |
Bryan T. Glaser
Burgess Lab
Monday, March 28, 2005
12:00 Noon
140 Bardeen
Studying the Interaction of E. coli Sigma Factors with Core
RNA Polymerase using Luminescence Resonance Energy Transfer
(LRET)
The Escherichia coli transcription machinery is comprised
of core RNA polymerase (a2bb'w)
along with one of seven sigma factors. Core, which is
able to bind DNA nonspecifically, is only able to recognize
specific promoters once it has bound a sigma factor, forming
the holoenzyme. Each sigma factor is responsible for driving
transcription of a different set of genes. Sigma70, which
regulates the "house keeping" genes, is thought to
be the most abundant sigma factor while also having one of the
highest affinities for core. If core is truly limited
in the cells, the question remains as to how the competition
among the seven sigma factors is regulated. We have constructed
a homogeneous assay based on Luminescence Resonance Energy Transfer
(LRET) to measure the binding affinity of each sigma factor
for RNAP in vitro. With this information we have
started to determine the strength of interaction and exchange
rate of each sigma factor with core RNAP and can begin to examine
how other proteins, small molecules, or the environment can
alter these properties.
References:
Paul, B.J. et al., DksA: A Critical Component of the Transcription
Initiation Machinery
That Potentiates the Regulation of rRNA Promoters by ppGpp
and the Initiating
NTP. Cell (2004) 118: 311-322.
Perederina, A. et al. Regulation through the Secondary
Channel- Structural Framework
for ppGpp-DksA Synergism during Transcription.
Cell (2004) 118: 297-309.
Zhao, K. et al. The global transcriptional response of
Escherichia coli to induced sigma
protein involves sigma regulon activation followed by
inactivation and
degradation of sigma in vivo. JBC (2005) in press. |
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There is no Frontiers in Pharmacology Seminar scheduled for
Tuesday, March 29, 2005.
*************************************************************************************
|
Delana Hopkins
Greenspan Lab
Monday, March 28, 2005
12:00 Noon
140 Bardeen
Regulation of DSPP Processing by Bone Morphogentic Protein-1
Dentin Sialophosphoprotein (DSPP) is a member of the SIBLING
(Small Integrin Binding LIgand N-linked Glycoproteins) family
of proteins. Members of the SIBLING family have a variety
of functions including: regulating the biomineralization of
bone and dentin and activation of matrix metalloproteinases,
and may be upregulated in some cancers. DSPP is a precursor
protein comprised of a N-terminal dentin sialoprotein (DSP)
and C-terminal dentin phosphoprotein (DPP) and is processed
/in vivo/ to generate these two proteins. DPP is the
major non-collagenous protein in dentin and is involved in
the biomineralization of dentin. The Bone Morphogentic
Protein 1/Tolloid (BMP-1/TLD) family of metalloproteinases
are involved in the proteolytic processing of a variety of
extracellular proteins including procollagen, chordin, alpha
2 macroglobulin, myostatin, lysyl oxidase and small leucine
rich proteoglycans such as osteoglycin, biglycan, and decorin.
BMP-1/TLD like proteinases usually cleave just N-terminal
to an aspartate residue, although little else is known about
any sort of consensus sequence for these proteins. When
isolated from tissue, DPP begins with an Asp-Asp-Pro sequence.
This observation combined with a previous paper from our lab
showing that BMP-1/TLD like proteinases cleave dentin matrix
protein 1, another SIBLING, led us to investigate these enzymes
in the processing of DSPP. We have shown that
BMP-1/TLD like proteinases can process recombinant DSPP to
generate fragments consistent in size to those observed /in
vivo/. |
Scott LeBlanc
Svaren Lab
Monday, April 4, 2005
12:00 Noon
140 Bardeen
Mechanisms of Activity by Dominant-Negative EGR2 Mutants
Abstract:
The EGR2/Krox-20 transcriptional activator serves as a master
regulator of peripheral nerve myelination. Previous studies
revealed that EGR2 expression in Schwann cells strongly increases
the expression of many myelin-related genes, as well as genes
involved in lipid/cholesterol biosynthesis. Recently, several
dominant EGR2 mutations have been identified in the conserved
DNA binding domain, and these correlate with human peripheral
neuropathies. The dominant- negative effect of EGR2 mutants
is both cell type-specific as well as dependent on promoter
context. In order to explore the mechanism of dominant activity
by these mutants, we have focused on the regulation of myelin
protein zero (MPZ), as it is the most highly expressed myelin
gene and is deregulated in the presence of dominant EGR2 mutants.
We have shown that a neuropathy-associated EGR2 mutant will
inhibit activation of a genomic clone of MPZ by wildtype EGR2.
We have also used this assay to define domains within EGR2 which
are essential for dominant activity, and our work suggests that
the N-terminal activation domain is necessary for this effect.
In addition, we have identified an EGR2 responsive segment within
the first intron of the MPZ gene that retains sensitivity to
dominant mutants, and we have demonstrated an association of
EGR2 with this region in vivo using chromatin immunoprecipitation
assays. As not all EGR2 target genes are similarly regulated
by EGR2 mutants, further characterization of this region will
provide an understanding of how the transcriptional template
is involved in the dominant-negative activity of the EGR2 mutants. |
Ka Young Chung
Walker Lab
Monday, April 4, 2005
12:00 Noon
140 Bardeen
Proteomic Analysis of Endothelin Signaling in Cardiac Myocytes
Endothelin has been known to affect the contractile properties
and to stimulate cardiac myocyte growth and myofibrillogenesis.
In previous report, we found that endothelin receptor is colocalized
with several signaling molecules such as PLC-b1 and PKCe.
To understand the signaling pathway of endothelin in cardiac
myocytes, we identified the component of endothelin receptor
complex using immunoprecipitation and mass spectrometry.
We found that endothelin receptor form complex with ion-regulating,
lipid-regulating, signaling and cytoskeletal proteins, and with
other receptors. Some of the proteins were also known
to be exist at T-tubules. Furthermore, the composition
of the complex changes dynamically in response to activation
by ET-1. |
Jennifer Lamberski
Burgess Lab
Monday, April 11, 2005
12:00 Noon
140 Bardeen
Studying Estrogen-Related Receptor alpha--Coactivator Interactions
in Breast Cancer Cells
Breast cancer is the second leading cause of death among
women in the United States. Estrogen receptors
(ER-alpha, ER-beta) are a primary focus of the etiology and
therapy of breast cancers. ER-alpha-positive breast
cancers have a better prognosis and have traditionally
been treated with tamoxifen, a selective estrogen receptor
modulator (SERM), or inhibitors of aromatase, an enzyme involved
in estrogen synthesis. ER-alpha-negative breast cancers,
which occur in 25% of patients, do not respond to anti-estrogen
treatment, are more aggressive, and function through unknown
mechanisms (Rochefort et al., 2003). Estrogen-related
receptor alpha (ERR-alpha) is a protein with sequence similarity
to ER-alpha, yet it does not bind estrogen. ERR-alpha
can function as either a repressor, down-modulating ER-alpha-regulated
transcription, or as a constitutive activator, acting independently
of the presence of estrogens and tamoxifen. Whether
ERR-alpha functions as a repressor or as a constitutive activator
is likely determined in part by post-translational phosphorylation
modifications occurring via the ErbB2/MAPK signaling pathway
(Ariazi et al., 2004). Thus, ERR-alpha probably plays
an important role in the etiology and progression of a subset
of breast cancers, especially ErbB2-positive cases that are
ER-alpha-negative or resistant to tamoxifen.The long-term
goal of my project is to find a new treatment for human breast
cancer, particularly for aggressive breast cancers that are
ER-alpha-negative or tamoxifen resistant, and resistant to
currently available therapies. I hypothesize that ERR-alpha
is constitutively activated in a subset of breast cancers
and is regulating transcription of estrogen-response element
(ERE)-containing genes by binding specific coactivators.
Therefore, I believe that the ERR-alpha-coactivator interaction
is a promising target for new chemotherapeutic drug development.
The immediate goals are to purify specific coactivators of
ERR-alpha by gentle immunoaffinity chromatography, to identify
these associated proteins, and to study their binding properties
to ERR-alpha in vitro. By understanding these aspects
of ERR-alpha regulation, I will be able to develop a high-throughput
screen to identify compounds that interfere with the target
interaction between ERR-alpha and the coactivator. This screen
could provide a possible new chemotherapeutic candidate for
treating aggressive tumors that do not respond to anti-estrogen
therapies.
---------------------------------
Rochefort H, Glondu M, Sahla ME, Platet N, Garcia M.
How to target estrogen receptor-negative breast cancer?
Endocr Relat Cancer 10: 261-266, 2003.
Ariazi EA, Kraus RJ, Jordan VC, Mertz JE. Estrogen-related
receptor alpha's transcriptional activities are regulated
in part via the EGFR
and ErbB2 (HER2) signaling pathways. In revision, 2004. |
Angela Mabb
Miyamoto Lab
Monday, April 11, 2005
12:00 Noon
140 Bardeen
A SUMO Ligase for NEMO
Nuclear Factor-kappaB (NF-kB) is a transcription factor that
regulates a diverse subset of genes such as those involved
in immune function, growth control, and regulation of apoptosis.
NF-kB can be activated by a wide variety of stimuli such as
tumor necrosis factor alpha (TNFa), interleukin-1 (IL-1),
lipopolysacharride (LPS), and DNA damaging agents (ionizing
radiation and chemotherapeutic drugs such as camptothecin
and etoposide). Recently, it has been proposed that
enhanced NF-kB activity in cancer cells may promote their
survival. As a result, inhibitors for this pathway are
being investigated for their ability to enhance cancer cell
death. The orchestration of events responsible for activation
of NF-kB in response to DNA damaging agents requires sequential
posttranslational modifications of a regulatory subunit essential
for NF-kB activation, known as NEMO. We are interested
in the first known posttranslational modification of NEMO
in this pathway, SUMOylation. The process of SUMOylation
requires the use of two enzymes, an E1 (Aos1-Uba2) and E2
(Ubc9). However, whether there is a SUMO ligase (E3)
for NEMO is unknown. Using an siRNA screen for all known
SUMO E3's, we have identified a SUMO E3 that plays a critical
role in NF-kB activation in response to DNA damaging agents.
Furthermore, overexpression of this E3 is able to enhance
NF-kB activity in a DNA damage specific manner and has the
ability to promote SUMOylation of NEMO both in vitro and in
vivo. We found that endogenous NEMO interacted with
this SUMO E3 in a DNA damage inducible manner. Analysis
using NEMO truncation mutants revealed that this SUMO E3 binds
NEMO in its CC1 domain region thus suggesting that this SUMO
E3 is the putative E3 for NEMO. As a result, we propose
that inhibition of the SUMO E3 for NEMO may enhance the proapoptotic
effects of certain chemotherapeutic agents by preventing NF-kB
activation. |
*******************************************************************************************
There is no Frontiers in Pharmacology Seminar scheduled
for Tuesday, April 12, 2005.
******************************************************************************************* |
|
Cynthia Koziol
Bertics Lab
Monday, April 18, 2005
12:00 Noon
140 Bardeen
Asthma is a disease that affects over 20 million Americans
today. To date, there is no cure for the disease, only
temporary treatments. The disease is characterized by
variable airflow obstruction, airway hyper-responsiveness,
and chronic airway inflammation. These symptoms are
due to cellular responses from both immune cells and the surrounding
tissues. Eosinophils, a type of immune cell associated
with the inflammation in allergic disease, are commonly found
to be highly activated and present in the lungs of asthmatic
patients. The molecular mechanisms of how the eosinophils
migrate/chemotax to the area of inflammation, and the mechanism
behind how chemoattractants modulate other processes such
as degranulation, are poorly understood. The low molecular
weight G protein, Rac, is known to modulate a number of functions
in neutrophils, a cell closely related to eosinophils.
The role that Rac plays in eosinophil function is not well
understood. We hypothesize that chemoattractant stimulation
functions to activate Rac to promote eosinophil actin reorganization,
migration/chemotaxis, and cause degranulation to occur. |
|
Amanda Branam
Greenspan Lab
Monday, April 18, 2005
12:00 Noon
140 Bardeen
Chordin is an extracellular BMP (Bone Morphogenetic Protein)
signaling antagonist. It functions by binding to the
BMPs and preventing the BMPs from binding to their receptors
and initiating signaling. BMP-1 differs from the rest
of the BMP family in that it does not function as a growth
factor but rather as a proteinase. BMP-1 has been shown
to be involved in the proteolytic processing of several extracellular
matrix proteins. One of its substrates is chordin.
Upon BMP-1 cleavage of chordin, the bound BMP is released
and free to bind to its receptor and initiate signaling.
Recently, two proteins with homology to chordin, Chordin-
Like 1 (CHL1) and Chordin-Like 2 (CHL2), have been discovered.
Both of these proteins have been shown to function similarly
to chordin and share similar domain structures. From
this information, we suspect that CHL1 and CHL2 may also be
substrates for BMP-1. |
Monica Gavala
Bertics Lab
Monday, April 25, 2005
12:00 Noon
140 Bardeen
P2X7 Nucleotide Receptor Regulation of COX-2 Production in Monocytes/Macrophages
Inflammation is a localized protective reaction of tissues
to injury or infection and is mediated by substances released
from leukocytes present in the inflammatory microenvironment.
Usually accompanying infection or inflammation is the release
of a high concentration of extracellular nucleotides, supplying
a source of ligands for purinergic receptors that are present
on the cell surface of many immune cells. One particular nucleotide
receptor that is mainly expressed on leukocytes is the P2X7
receptor (P2X7R). Previous work with P2X7R has linked this
receptor to the modulation of macrophage responsiveness to
inflammatory stimuli. In a mAb-induced arthritis model, the
P2X7R knock out mice were markedly less affected by the disease.
To elucidate the mechanism by which the P2X7R modulates inflammation,
the effect of P2X7R activation on induced inflammatory endpoints,
such as the production of prostaglandins, in macrophages and
monocytes (macrophage precursor cells) is currently under
investigation. Cyclooxygenase-2 (COX-2) expression has been
implicated as the main route for increased prostaglandin synthesis
at the sites of inflammation and data in our lab supports
that its expression is up-regulated upon P2X7R stimulation.
Previous studies, along with my preliminary data, suggest
that stimulation of mitogen-activated protein kinase (MAPK)
cascades, and the control of transcription via cAMP response
element binding protein (CREB)-linked pathways, are potentially
involved in the nucleotide regulation of inflammation. Therefore,
it is hypothesized that signaling cascade can provide a link
between P2X7R activation and COX-2 expression. |
Subramaniam Ramachandran
Ruoho Lab
Monday, April 25, 2005
12:00 Noon
140 Bardeen
Purification and Characterization of the Sigma receptor
Sigma receptors once considered as a class of opioid receptors
are now regarded as unique orphan receptors, which contain
binding sites for a range of various compounds including cocaine,
antipsychotics such as haloperidol and steroids such as progesterone.
The sigma 1 receptor has been cloned from guinea pig liver,
rat brain, mouse kidney and human placenta and encodes a protein
of 223 amino acids. All cloned sigma receptors share grater
than 90% sequence identity. Various functions have been proposed
for the sigma 1 receptor such as regulation of intracellular
Ca2+ release [1], inhibition of K+ channels [2] and antitumour
effects both in vitro and in vivo [3]. Association of the
sigma 1 receptor with voltage gated potassium channels and
inhibition of channel gating has led to the idea that the
sigma 1 receptor is a subunit voltage gated potassium channels
[4]. Recently sigma 1 receptor knockout mice have been generated
and do not display any overt phenotype [5].
As a first step to characterizing the sigma receptor, we have
developed a scheme for the purification of the guinea pig
sigma receptor from E. coli. The sigma receptor is expressed
in E. coli as a maltose binding protein (MBP) fusion protein.
The fusion protein was purified on an amylose column, cleaved
with Factor Xa and further purified on a Ni2+ affinity column.
The Ni2+ column eluate was purified using an anti-MBP antibody
linked to sepharose to remove the uncleaved MBP-sigma fusion
protein. Radioligand binding studies using [3H] (+) pentazocine
indicated that 40-45% of the fusion protein is in a state
competent to bind ligand, assuming a 1:1 stoichiometry ligand
to protein molecules. Surprisingly when a haloperidol affinity
column was used, all the receptor bound tightly to the
column. This observation suggests that the receptor may exist
in an oligomeric state perhaps binding [3H] (+) pentazocine
as a homodimer.
References:
1. Hayashi, T. and T.P. Su, Regulating ankyrin dynamics:
Roles of sigma-1 receptors. Proc Natl Acad Sci U S A, 2001.
98(2): p. 491-6.
2. Wilke, R.A., et al., K+ channel modulation in rodent
neurohypophysial nerveterminals by sigma receptors and not
by dopamine receptors. J Physiol, 1999. 517 ( Pt 2): p. 391-406.
3. Spruce, B.A., et al., Small molecule antagonists
of the sigma-1 receptor causeselective release of the
death program in tumor and self-reliant cells and inhibit
tumor growth in vitro and in vivo. Cancer Res, 2004. 64(14):
p. 4875-86.
4. Aydar, E., et al., The sigma receptor as a ligand-regulated
auxiliary potassium channel subunit. Neuron, 2002. 34(3):
p. 399-410.5. Langa, F., et al., Generation and phenotypic
analysis of sigma receptor type I (sigma1) knockout mice.
Eur J Neurosci, 2003. 18(8): p. 2188-96. |
Jill L. Humston
Ervasti Lab
Monday, May 2, 2005
12:00 Noon
140 Bardeen
Dystrophin and BPAG1b : A connection in skeletal muscle disease?
Duchenne Muscular Dystrophy (DMD) is an X-linked recessive progressive
muscle wasting disorder that is caused by mutations resulting
in the absence of or non-functional DMD gene product, dystrophin.
Dystrophin binds cytoplasmic g-actin through its N-terminal
and rod domains. Through the cysteine-rich/C-terminal domain
(CR/CT), dystrophin associates with a complex of glycoproteins
at the sarcolemmal membrane, known as the dystrophin-glycoprotein
complex, or the DGC. Dystrophin association with the DGC is
mediated directly through binding to the C-terminus of b-dystroglycan,
stabilizing the sarcolemma against force transduction during
muscle contraction. Utrophin, a dystrophin-related protein,
has similar domain structure and high sequence homology. We
are quantitatively characterizing and comparing the binding
interaction of recombinant full-length utrophin and dystrophin
with b-dystroglycan. Additionally, we used recombinant full-length
utrophin as an affinity probe with muscle homogenates from control
mice to pull down novel molecular partners, and analyzed proteins
of interest with mass spectrometry. One identified protein was
BPAG1b (bullous pemphigoid antigen 1b), which is a cytoskeletal
linker protein that can crosslink actin, intermediate filaments
and microtubules. Dystonia musculorum (dt) is a hereditary neurodegeneration
syndrome and is caused by defects in the BPAG1 gene (2;3). BPAG1-deficient
mice exhibit an intrinsic muscle weakness and membrane instability
(1), phenotypically similar to the mdx mouse, a dystrophin-deficient
animal model for DMD. We are further characterizing the muscle
phenotype of BPAG1-/- animals for comparison to the phenotypes
manifest in mdx mice.
References:
1. Dalpe, G., Mathieu, M., Comtois, A., Zhu, E.,
Wasiak, S., De Repetigny, Y., Leclerc, N., and Kothary, R.
(1999) Dev.Biol. 210, 367-380
2. Dowling, J., Yang, Y., Wollmann, R., Reichardt,
L. F., and Fuchs, E. (1997) Dev.Biol. 187, 131-142
3. Guo, L., Degenstein, L., Dowling, J., Yu, Q.
C., Wollmann, R., Perman, B., and Fuchs, E. (1995) Cell 81,
233-243 |
Chateen Carbonara
Anderson Lab
Monday, May 2, 2005
12:00 Noon
140 Bardeen
Type I Phosphatidylinositol-4-Phosphate 5-Kinase Ig Interacts
with E-Cadherin to Regulate Cell-Cell Contact Assembly
The Epithelial-Mesenchymal Transition (EMT) is a normal process
that occurs during embryonic development and wound healing.
EMT is a reversible process that occurs when cells lose their
cell-cell contacts, migrate to different subcellular locations,
and then reacquire their cell-cell adhesions. When the normal
functions of EMT are perturbed or when this process becomes
misregulated, this can lead to cells migrating and integrating
in distant organs. While many signaling pathways have been
implicated in EMT, it is not fully clear as to how this process
is initiated and perpetuated. Members of the cadherin family
play an important role in the formation of cell-cell adhesions
and thus mediate events such as wound healing, cell migration,
and the establishment of tissue architecture. The expression
of different cadherin isoforms during various stages of development
promotes proper cell differentiation and provides cues for
the maintenance of tissue and organ integrity. One specific
cadherin isoform, E-cadherin (epithelia-cadherin), plays a
key role in cellular organization during embryogenesis and
organogenesis, as well as in morphogenesis and wound healing
in mature organisms. Modulation ofE-cadherin cell-cell adhesions
occurs through signaling via the PI 3-kinase, Rac, FAK, Src,
and Ras pathways. Evidence from our lab also suggests that
E-cadherin assembly is regulated by generation of the second
messenger phosphatidylinositol-4,5-bisphosphate (PI4,5P2).
PI4,5P2 is synthesized by Type I phosphatidylinositol phosphate
kinases (PIPKIs) in a spatially and temporally regulated manner
in cells. We have discovered an interaction between one specific
isoform, PIPKIg, and E-cadherin in vitro and in vivo at cell-cell
contacts in normal epithelial cells. Upon knockdown of PIPKIg
in these cell lines, we observe a change in phenotype from
a polarized epithelial phenotype to a scattered and motile
fibroblastic cell that resembles a cell undergoing EMT. We
propose that PIPKIg expression and association with E-cadherin
modulates the assembly of E-cadherin into cell-cell adhesions.
Expression of a cytoplasmic E-cadherin tail in epithelial
cells perturbs endogenous E-cadherin function and targeting.
This approach will be utilized to delineate the role of PIPKIg
in mediating cell-cell contacts. How PIPKIg modulates E-cadherin
assembly, targeting, or turnover in cells will be investigated
using biochemical and cell biological approaches. |
Emily Vaughan
Keely Lab
Monday, May 16, 2005
12:00 Noon
140 Bardeen
Determining how extracellular matrix rigidity regulates proliferation
in mammary epithelial cells
In vivo, the properties of the extracellular matrix (ECM)
surrounding mammary epithelial cells can regulate proliferation
and differentiation. By growing mammary epithelial cells
in a 3D collagen matrix, we can manipulate the rigidity and
density of the ECM in order to study how these processes are
regulated. Cells are grown in rigid or attached gels,
where the collagen gel is left attached to the dish, and floating
gels, where the gel is detached and floated in culture media.
Cells grown in attached gels have a more proliferative phenotype,
while those grown in floating gels are able to contract the
gel and differentiate into structures similar to those found
in vivo. Our lab has previously shown that in T47D cells,
activity of the small GTPase Rho and Focal Adhesion Kinase (FAK)
are important in regulating the response to rigidity.
Using MCF10A cells, we are now determining how proliferation
is regulated using this system. Specifically, we are interested
in the timing of cell cycle regulation and cyclin expression.
It is known that cyclins expressed during the G1 phase of the
cell cycle (cyclins D1 and E) are regulated by adhesion, and
we hypothesize that these cyclins may also be regulated by rigidity.
Knowledge of how ECM rigidity regulates proliferation is important
in the breast cancer research field, as dense breast tissue
is the leading risk factor for breast cancer. |
Dominique Fontanilla
Ruoho Lab
Monday, May 16, 2005
12:00 p.m.
140 Bardeen
Mapping the Sigma1 Receptor Binding Site
The sigma receptor represents a ubiquitously expressed unique
binding site in the CNS and is a member of the orphan receptor
class for which no endogenous ligand is known. It is known,
however, that the sigma receptor binds with high affinity to
several classes of chemically unrelated ligands such as neurosteroids,
neuroleptics, dextrobenzomorphans,and cocaine. Consequently,
it is thought that the sigma receptor may mediate the immunosuppressant,
antipsychotic, and neuroprotective effects of drugs. Functionally,
sigma 1 receptor ligands have been shown to modulate voltage-gated
K+ channels independently of G-proteins or kinases (1). They
have also been shown to mediate calcium release from intracellular
stores (2), regulate compartmentalization of lipids on ER (3),
and have antitumour activity in vitro and in vivo
(4).
The sigma1 receptor has been shown to have three hydrophobic
regions, two of which, have highly conserved residues between
the sigma receptor and the yeast C8-C7 sterol isomerase (ERG2)
(5). These regions have thus been termed steroid binding domains
1 and 2 (SBD1 and SBD2). Previous photoaffinity labeling work
in our lab has implicated Asp 188 in SBD2 as a ligand-binding
target using a 3-iodo-4-azidococaine photoprobe. Currently,
we aim to probe the SBD1 region by synthesizing photoprobes
that have their photoreactive group on moieties that we hypothesize
are interacting with this domain. Therefore, N-alkyl-N'-aralkyl
derivatives which mimic the pharmacophore found in many sigma1
ligands have been synthesized as well as an N-substituted cocaine
derivative. The binding affinities of these compounds
have been characterized by competitive displacement against
[3H] (+) pentazocine, which is selective for sigma1. Preliminary
data for one N-alkyl-N'-aralkyl derivative as a radioactive
photoaffinity label shows sigma1-specific binding that can be
protected by haloperidol, a neuroleptic with high affinity for
sigma1 receptors.
References:
1) Wilke, R.A. et al. (1999). J. PHysiol. 517, 391-406.
2) Hayashi, T. and Su. T.P. (2001). PNAS. USA. 98, 491-496.
3) Hayashi, T. and Su, T.P.(2003). JPET. 306, 718-725.
4) Berthois, Y. et al. (2003). B.J. Cancer. 88, 438-446.
5) Jbilo, O. et al. (1997) JBC. 272(43):27107-15. |
Nicholas Schill
R. A. Anderson Lab
Monday, 23 May 2005
12:00 PM
140 Bardeen
Identification of Novel Phosphatidylinositol 4-phosphate
5-kinase Splice Variants
The spatial and temporal metabolism of phosphoinositides is
important in the modulation of many cell signaling functions.
Phosphatidylinositol 4, 5-bisphosphate (PIP2) is a lipid signaling
molecule which has been shown to play a role in the regulation
of endocytosis, actin assembly, cell migration, and the maintenance
of cellular adhesion structures. Phosphatidylinositol 4-phosphate
5-kinase type I gamma (PIPKIg), splice variant 661, has been
shown to synthesize PIP2 at, and localize to, focal adhesions
via its interaction with the adhesion molecule talin. Recently,
PIPKIg was shown to also interact with E-cadherin and localize
to adherens junctions in polarized epithelial cells. However,
the splice variant of PIPKIg interacting with E-cadherin remains
to be identified. I employed 3' rapid amplification of cDNA
ends (RACE) to identify two previously unknown C-terminal splice
variants of PIPKIg from MCF10A cells. The variants, termed PIPKIg700
and PIPKIg707, were found to be encoded by a portion of the
human PIPKIg gene previously thought to be intronic sequence.
Corresponding sequence for the PIPKIg707 variant was also identified
in the mouse, dog and rat genomes. The discovery of these two
splice variants supports our hypothesis that variation of the
C-terminal end of PIPKIg may be a way for the cell to provide
controlled, localized PIP2 production for different cellular
functions. |
David L. Mellman
Richard A. Anderson Labo
Monday, May 23, 2005
12:00 Noon
140 Bardeen
IaIP9: A new poly(A) polymerase which interacts with PIPKIa
and localizes at nuclear speckles
PIPKIa is one of three type I PIP
Kinases which generates PI4,5P2 utilizing PI(4)P as a substrate.
PI4,5P2 is a known second messenger molecule which regulates
numerous signaling events within the cell. It has been reported
that PIPKIa localizes at nuclear
speckles and it has also been reported that PI4,5P2 is at nuclear
speckles. Although, nothing has been reported about how nuclear
generated PI4,5P2 regulates nuclear signaling events, such as
the processing of pre-mRNA.
We have characterized the targeting of PIPKIa to nuclear speckles and have found that the C-terminus of PIPKIa is the portion of the molecule which targets it to nuclear speckles.
In order to discover proteins which interact with the C-terminus
of PIPKIa and may target to speckles as well, we performed a
yeast two-hybrid screen using the C-terminus of PIPKIa as the bait. From this screen, we isolated a molecule which
appears to be a new poly(A) polymerase. This new poly(A) polymerase
is for now called IaIP9: Ia because
PIPKIa was used as a bait in the
yeast two-hybrid screen, and IP9 for Interacting Protein 9,
hence IaIP9.
We have begun a thorough examination of IaIP9.
We have found that endogenous IaIP9
localizes at nuclear speckles and importantly, we have found
that IaIP9 has poly(A) polymerase
activity in vitro. Based upon the primary sequence alignment
of the poly(A) polymerase module of IaIP9
versus the polymerase module of known poly(A) polymerases, the
poly(A) polymerase module of IaIP9 shows a large degree of divergence.
For example, the polymerase module of IaIP9
is a split domain linked by a proline rich region, a sequence
characteristic not seen in any known poly(A) polymerase. Although,
the critical residues within the nucleotidyl transferase motif,
the portion of the poly(A) polymerase module necessary for transferring
AMP from ATP to the 3'-end of the mRNA are conserved. Moreover,
we have found that endogenous IaIP9
can be Co-Immunoprecipitated with endogenous symplekin, a known
protein component of the nuclear polyadenylation complex. Taken
together, these data imply that IaIP9
is part of a nuclear polyadenylation complex inside the cell
where it can localize at nuclear speckles and act in the capacity
as a poly(A) polymerase. |
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